PROGRAM SYSTEMS: THEORY AND APPLICATIONS

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Online Scientific Journal published by the Ailamazyan Program Systems Institute of the Russian Academy of Sciences

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• Содержание выпуска •
• Mathematical Foundations of Programming •
• Software and Hardware for Distributed Systems and Supercomputers •
• Artificial Intelligence, Intelligence Systems, Neural Networks •
• Supercomputing Software and Hardware •
• Software and Hardware for Distributed Systems and Supercomputers •

Supercomputing Software and Hardware

Responsible for the Section: Sergei Abramov, Dr. Phys.-Math.Sci., corresponding member of RAS

On the left: assigned number of the paper, submission date, the number of A5 pages contained in the paper,
and the reference to the full-text PDF .

Article # 6_2017 14 с. PDF	submitted on 22th Dec 2016 displayed on website on 13th March 2017 A. Rybakov Inner representation and crossprocess exchange mechanism for block-structured grid for supercomputer calculations In the article block-structured grid inner representation, its basic objects description and their cooperation are considered. Also crossprocess data exchange mechanism for supercomputer calculations is described. (In Russian). Key words: supercomputer, mathematical modeling, block-structured calculation grid, inner representation, crossprocess exchange.
article citation	http://psta.psiras.ru/read/psta2017_1_121-134.pdf
DOI	https://doi.org/10.25209/2079-3316-2017-8-1-121-134
Article # 12_2017 24 с. PDF	submitted on 18th Dec 2016 displayed on website on 20th March 2017 Ekaterina Kulakova, Anastasia Spitsina, Anton Bogomolov, Nina Orlova, Artur Dergilev, Irina Chadaeva, Vladimir Babenko, Yuriy Orlov Program for analysis of genome distribution of chromosome contacts in cell nucleus by the data obtained using ChIA-PET and Hi-C technologies Due to the growth of genomics data there is an increasing need to develop new software for the processing and analysis of genomic data on chromosome contacts, transcription factor binding sites, and the genome features annotations based on modern sequencing technologies. We consider the technology of obtaining and analyzing genomic sequencing data based on ChIA-PET and Hi-C technologies. The computer program for statistical data processing and analysis methods for chromosome contacts data is presented. (In Russian). Key words: bioinformatics, sequencing, supercomputing, chromosome contact, graphical interface, databases.
article citation	http://psta.psiras.ru/read/psta2017_1_219-242.pdf
DOI	https://doi.org/10.25209/2079-3316-2017-8-1-219-242

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